sing makes one tree for each query sequence, showing uncertainty.
usage: sing [options] placefile[s]
| --point-mass | Treat every pquery as a point mass concentrated on the highest-weight placement. |
| --pp | Use posterior probability for the weight. |
| -o | Specify the filename to write to. |
| --out-dir | Specify the directory to write files to. |
| --prefix | Specify a string to be prepended to filenames. |
| --min-fat | The minimum branch length for fattened edges (to increase their visibility). To turn off set to 0. Default: 0.01 |
| --total-width | Set the total pixel width for all of the branches of the tree. Default: 300 |
| --width-factor | Override total-width by directly setting the number of pixels per unit of thing displayed. |
| --node-numbers | Put the node numbers in where the bootstraps usually go. |
| --xml | Write phyloXML (with colors) for all visualizations. |
| --node-numbers | Put the node numbers in where the bootstraps usually go. |
Only suggested for detailed analysis of a few sequences: because this makes one tree per query sequence, it can easily make very big files.