unifrac

unifrac calculates unifrac on two or more placefiles.

usage: unifrac 1.jplace 2.jplace [3.jplace [...]]

Options

--point-mass	Treat every pquery as a point mass concentrated on the highest-weight placement.
--pp	Use posterior probability for the weight.
-o	Specify the filename to write to.
--out-dir	Specify the directory to write files to.
--prefix	Specify a string to be prepended to filenames.
--csv	Output the results as csv instead of a padded matrix.
--list-out	Output the KR results as a list rather than a matrix.