mcl cluster pqueries using Markov clustering via MCL.

usage: mcl [options] placefile


-o Specify the filename to write to.
--out-dir Specify the directory to write files to.
--prefix Specify a string to be prepended to filenames.
--csv Output the results as csv instead of a padded matrix.
--pp Use posterior probability for the weight.
--inflation If specified, pass this as the inflation value to MCL.


Markov clustering done via the Markov Clustering Library MCL on the overlap graph (see the ograph documentation for information about the overlap graph).